Machine Learning for Precision Neuropsychiatry ML4PNP

Publications

Our research focuses on developing and validating machine learning methods for neuroimaging, with results disseminated through peer-reviewed publications and open scientific outputs. Our publications report methodological advances, empirical findings, and applied studies across EEG, MEG, and MRI data, with a particular emphasis on modeling individual variability and clinically relevant brain phenotypes. In line with open science principles, we aim to make our research transparent and reproducible by sharing code, data when possible, and preprints alongside formal journal publications.

Highlighted

MEGaNorm: Normative Modeling of MEG Brain Oscillations Across the Human Lifespan
MEGaNorm: Normative Modeling of MEG Brain Oscillations Across the Human Lifespan
Mohammad Zamanzadeh, Ymke Verduyn, Augustijn de Boer, Tomas Ros, Thomas Wolfers, Richard Dinga, Marie Šafář Postma, Andre F. Marquand, Marijn van Wingerden, Seyed Mostafa Kia
Springer Science and Business Media LLC  ·  21 Jul 2025  ·  doi:10.21203/rs.3.rs-6725132/v1

All

2025

The Combined Effects of Prefrontal tDCS and Slow-Paced Breathing on Stress Reactivity, Emotional Reactivity, and Emotion Regulation
The Combined Effects of Prefrontal tDCS and Slow-Paced Breathing on Stress Reactivity, Emotional Reactivity, and Emotion Regulation
Emmanuelle Schoonjans, Jens Allaert, Ymke Verduyn, Joni Houfflyn, Stefanie De Smet, Mitchel Kappen, Cristina Ottaviani, Rudi De Raedt, Marie Anne Vanderhasselt
Center for Open Science  ·  10 Dec 2025  ·  doi:10.31234/osf.io/r48j5_v1
MEGaNorm: Normative Modeling of MEG Brain Oscillations Across the Human Lifespan
MEGaNorm: Normative Modeling of MEG Brain Oscillations Across the Human Lifespan
Mohammad Zamanzadeh, Ymke Verduyn, Augustijn de Boer, Tomas Ros, Thomas Wolfers, Richard Dinga, Marie Šafář Postma, Andre F. Marquand, Marijn van Wingerden, Seyed Mostafa Kia
Springer Science and Business Media LLC  ·  21 Jul 2025  ·  doi:10.21203/rs.3.rs-6725132/v1
MEGaNorm: Normative Modeling of MEG Brain Oscillations Across the Human Lifespan
MEGaNorm: Normative Modeling of MEG Brain Oscillations Across the Human Lifespan
Mohammad Zamanzadeh, Ymke Verduyn, Augustijn de Boer, Tomas Ros, Thomas Wolfers, Richard Dinga, Marie Šafář Postma, Andre F. Marquand, Marijn van Wingerden, Seyed Mostafa Kia
Cold Spring Harbor Laboratory  ·  23 Jun 2025  ·  doi:10.1101/2025.06.23.660997
Normative modeling provides a principled framework for quantifying individual deviations from typical brain development and is increasingly used to study heterogeneity in neuropsychiatric conditions. While widely applied to structural phenotypes, functional normative models remain underdeveloped. Here, we introduce MEGaNorm, the first normative modeling framework for charting lifespan trajectories of resting-state magnetoencephalography (MEG) brain oscillations. Using a large, multi-site dataset comprising 1,846 individuals aged 6–88 and spanning three MEG systems, we model relative oscillatory power in canonical frequency bands using hierarchical Bayesian regression, accounting for age, sex, and site effects. To support interpretation at multiple scales, we introduce Neuro-Oscillo Charts, visual tools that summarize normative trajectories at the population level and quantify individual-level deviations, enabling personalized assessment of functional brain dynamics. Applying this framework to a Parkinson’s disease cohort (n = 160), we show that normative deviation scores reveal disease-related abnormalities and uncover a continuum of patients in theta–beta deviation space. This work provides the first lifespan-encompassing normative reference for MEG oscillations, enabling population-level characterization and individualized benchmarking. All models and tools are openly available and designed for federated, continual adaptation as new data become available, offering a scalable resource for precision neuropsychiatry.
Prognostic predictions in psychosis: exploring the complementary role of machine learning models
Prognostic predictions in psychosis: exploring the complementary role of machine learning models
Violet van Dee, Seyed M Kia, Caterina Fregosi, Wilma E Swildens, Anne Alkema, …, Judith Voogt, Inge Winter-van Rossum, Rene S Kahn, Wiepke Cahn, Hugo G Schnack
BMJ Mental Health  ·  01 Jun 2025  ·  doi:10.1136/bmjment-2025-301594
Prognostic predictions in psychosis: exploring the complementary role of machine learning models
Prognostic predictions in psychosis: exploring the complementary role of machine learning models
Violet van Dee, Seyed Mostafa Kia, Caterina Fregosi, Wilma E. Swildens, Anne Alkema, …, Judith Voogt, Inge Winter-van Rossum, René S. Kahn, Wiepke Cahn, Hugo G. Schnack
Cold Spring Harbor Laboratory  ·  02 Feb 2025  ·  doi:10.1101/2025.01.30.25321382

2024

Lifespan Normative Modeling of Brain Microstructure
Lifespan Normative Modeling of Brain Microstructure
Julio E. Villalón-Reina, Alyssa H. Zhu, Sebastian Benavidez, Clara A. Moreau, Yixue Feng, …, Neda Jahanshad, Carrie E. Bearden, Seyed Mostafa Kia, Andre F. Marquand, Paul M. Thompson
Cold Spring Harbor Laboratory  ·  17 Dec 2024  ·  doi:10.1101/2024.12.15.628527
Exploring potential ADHD biomarkers through advanced machine learning: An examination of audiovisual integration networks
Exploring potential ADHD biomarkers through advanced machine learning: An examination of audiovisual integration networks
Mohammad Zamanzadeh, Abbas Pourhedayat, Fatemeh Bakouie, Fatemeh Hadaeghi
Computers in Biology and Medicine  ·  01 Dec 2024  ·  doi:10.1016/j.compbiomed.2024.109240
Multiscale heterogeneity of functional connectivity in autism
Multiscale heterogeneity of functional connectivity in autism
Iva Ilioska, Marianne Oldehinkel, Alberto Llera, Maroš Rovný, Ting Mei, …, Maarten Mennes, Christian F. Beckmann, Andre Marquand, Jan K. Buitelaar, Alex Fornito
Cold Spring Harbor Laboratory  ·  22 Oct 2024  ·  doi:10.1101/2024.10.20.24315248
Psychosis Prognosis Predictor: A continuous and uncertainty aware prediction of treatment outcome in first episode psychosis
Psychosis Prognosis Predictor: A continuous and uncertainty‐aware prediction of treatment outcome in first‐episode psychosis
Daniël P. J. van Opstal, Seyed Mostafa Kia, Lea Jakob, Metten Somers, Iris E. C. Sommer, Inge Winter‐van Rossum, René S. Kahn, Wiepke Cahn, Hugo G. Schnack
Acta Psychiatrica Scandinavica  ·  18 Sep 2024  ·  doi:10.1111/acps.13754
Nonlinear latent representations of high-dimensional task-fMRI data: Unveiling cognitive and behavioral insights in heterogeneous spatial maps
Nonlinear latent representations of high-dimensional task-fMRI data: Unveiling cognitive and behavioral insights in heterogeneous spatial maps
Mariam Zabihi, Seyed Mostafa Kia, Thomas Wolfers, Stijn de Boer, Charlotte Fraza, Richard Dinga, Alberto Llera Arenas, Danilo Bzdok, Christian F. Beckmann, Andre Marquand
PLOS ONE  ·  08 Aug 2024  ·  doi:10.1371/journal.pone.0308329
Multiscale heterogeneity of white matter morphometry in psychiatric disorders
Multiscale heterogeneity of white matter morphometry in psychiatric disorders
Ashlea Segal, Robert E Smith, Sidhant Chopra, Stuart Oldham, Linden Parkes, …, Michael Berk, Sue Cotton, Mark A Bellgrove, Andre F Marquand, Alex Fornito
Cold Spring Harbor Laboratory  ·  06 Aug 2024  ·  doi:10.1101/2024.08.04.606523
A 10-Year Longitudinal Study of Brain Cortical Thickness in People with First-Episode Psychosis Using Normative Models
A 10-Year Longitudinal Study of Brain Cortical Thickness in People with First-Episode Psychosis Using Normative Models
Pierre Berthet, Beathe C Haatveit, Rikka Kjelkenes, Amanda Worker, Seyed Mostafa Kia, …, Ole A Andreassen, Carmen Simonsen, Lars T Westlye, Ingrid Melle, Andre Marquand
Schizophrenia Bulletin  ·  05 Jul 2024  ·  doi:10.1093/schbul/sbae107
Gender and emotion recognition from EEG and eye movement patterns
Gender and emotion recognition from EEG and eye movement patterns
Maneesh Bilalpur, Seyed Mostafa Kia, Mohan Kankanhalli, Ramanathan Subramanian, M. Murugappan
Affective Computing Applications using Artificial Intelligence in Healthcare: Methods, approaches and challenges in system design  ·  04 Jun 2024  ·  doi:10.1049/pbhe056e_ch3
A 10-Year Longitudinal Study of Brain Cortical Thickness in People with First-Episode Psychosis using Normative Models
A 10-Year Longitudinal Study of Brain Cortical Thickness in People with First-Episode Psychosis using Normative Models
Pierre Berthet, Beathe C. Haatveit, Rikka Kjelkenes, Amanda Worker, Seyed Mostafa Kia, …, Ole A. Andreassen, Carmen Simonsen, Lars T. Westlye, Ingrid Melle, Andre Marquand
Cold Spring Harbor Laboratory  ·  22 Apr 2024  ·  doi:10.1101/2024.04.19.24306008
Non-Gaussian normative modelling with hierarchical Bayesian regression
Non-Gaussian normative modelling with hierarchical Bayesian regression
Augustijn A. A. de Boer, Johanna M. M. Bayer, Seyed Mostafa Kia, Saige Rutherford, Mariam Zabihi, …, Lars T. Westlye, Ole A. Andreassen, Max Hinne, Christian F. Beckmann, Andre Marquand
Imaging Neuroscience  ·  01 Apr 2024  ·  doi:10.1162/imag_a_00132
Structural brain abnormalities and aggressive behaviour in schizophrenia: Mega-analysis of data from 2095 patients and 2861 healthy controls via the ENIGMA consortium
Structural brain abnormalities and aggressive behaviour in schizophrenia: Mega-analysis of data from 2095 patients and 2861 healthy controls via the ENIGMA consortium
Jelle Lamsma, Adrian Raine, Seyed M. Kia, Wiepke Cahn, Dominic Arold, …, Jim van Os, Daniela Vecchio, Lei Wang, Adrian Wroblewski, Thomas Nickl-Jockschat
Cold Spring Harbor Laboratory  ·  05 Feb 2024  ·  doi:10.1101/2024.02.04.24302268
Estimating cortical thickness trajectories in children across different scanners using transfer learning from normative models
Estimating cortical thickness trajectories in children across different scanners using transfer learning from normative models
C. Gaiser, P. Berthet, S. M. Kia, M. A. Frens, C. F. Beckmann, R. L. Muetzel, Andre F. Marquand
Human Brain Mapping  ·  01 Feb 2024  ·  doi:10.1002/HBM.26565
Alzheimer s disease heterogeneity revealed by neuroanatomical normative modeling
Alzheimer's disease heterogeneity revealed by neuroanatomical normative modeling
Flavia Loreto, Serena Verdi, Seyed Mostafa Kia, Aleksandar Duvnjak, Haneen Hakeem, …, Zarni Win, Richard Perry, Andre F. Marquand, James H. Cole, Paresh Malhotra
Alzheimer's & Dementia: Diagnosis, Assessment & Disease Monitoring  ·  01 Jan 2024  ·  doi:10.1002/dad2.12559

2023

Extreme deviations from the normative model reveal cortical heterogeneity and associations with negative symptom severity in first-episode psychosis from the OPTiMiSE and GAP studies
Extreme deviations from the normative model reveal cortical heterogeneity and associations with negative symptom severity in first-episode psychosis from the OPTiMiSE and GAP studies
Amanda Worker, Pierre Berthert, Andrew J. Lawrence, Seyed Mostafa Kia, Celso Arango, …, Mark Weiser, Inge Winter-van Rossum, Philip McGuire, Paola Dazzan, Andre F. Marquand
Translational Psychiatry  ·  02 Dec 2023  ·  doi:10.1038/S41398-023-02661-6
Predictive Clinical Neuroscience Portal PCNportal : instant online access to research-grade normative models for clinical neuroscientists.
Predictive Clinical Neuroscience Portal (PCNportal): instant online access to research-grade normative models for clinical neuroscientists.
Pieter Barkema, Saige Rutherford, Hurng-Chun Lee, Seyed Mostafa Kia, Hannah Savage, Christian Beckmann, Andre Marquand
Wellcome Open Research  ·  20 Nov 2023  ·  doi:10.12688/wellcomeopenres.19591.2
Revealing the impact of psychiatric comorbidities on treatment outcome in early psychosis using counterfactual model explanation
Revealing the impact of psychiatric comorbidities on treatment outcome in early psychosis using counterfactual model explanation
Violet van Dee, Seyed Mostafa Kia, Inge Winter-van Rossum, René S. Kahn, Wiepke Cahn, Hugo G. Schnack
Frontiers in Psychiatry  ·  12 Oct 2023  ·  doi:10.3389/FPSYT.2023.1237490
A stable and replicable neural signature of lifespan adversity in the adult brain
A stable and replicable neural signature of lifespan adversity in the adult brain
Nathalie E. Holz, Mariam Zabihi, Seyed Mostafa Kia, Maximillian Monninger, Pascal-M. Aggensteiner, …, Juliane H. Fröhner, Michael N. Smolka, Henrik Walter, Tobias Banaschewski, Andre F. Marquand
Nature Neuroscience  ·  21 Aug 2023  ·  doi:10.1038/S41593-023-01410-8
Regional, circuit and network heterogeneity of brain abnormalities in psychiatric disorders
Regional, circuit and network heterogeneity of brain abnormalities in psychiatric disorders
Ashlea Segal, Linden Parkes, Kevin Aquino, Seyed Mostafa Kia, Thomas Wolfers, …, Michael Berk, Sue Cotton, Mark A. Bellgrove, Andre F. Marquand, Alex Fornito
Nature Neuroscience  ·  14 Aug 2023  ·  doi:10.1038/s41593-023-01404-6
Predictive Clinical Neuroscience Portal PCNportal : instant online access to research-grade normative models for clinical neuroscientists.
Predictive Clinical Neuroscience Portal (PCNportal): instant online access to research-grade normative models for clinical neuroscientists.
Pieter Barkema, Saige Rutherford, Hurng-Chun Lee, Seyed Mostafa Kia, Hannah Savage, Christian Beckmann, Andre Marquand
Wellcome Open Research  ·  26 Jul 2023  ·  doi:10.12688/wellcomeopenres.19591.1
Psychosis Prognosis Predictor: A Continuous and Uncertainty-Aware Prediction of Treatment Outcome in First-Episode Psychosis
Psychosis Prognosis Predictor: A Continuous and Uncertainty-Aware Prediction of Treatment Outcome in First-Episode Psychosis
Daniël P.J. van Opstal, Seyed Mostafa Kia, Lea Jakob, Metten Somers, Iris E. C. Sommer, Inge Winter-van Rossum, René S. Kahn, Wiepke Cahn, Hugo G. Schnack
Cold Spring Harbor Laboratory  ·  07 Jul 2023  ·  doi:10.1101/2023.07.05.23292252
Revealing Individual Neuroanatomical Heterogeneity in Alzheimer Disease Using Neuroanatomical Normative Modeling
Revealing Individual Neuroanatomical Heterogeneity in Alzheimer Disease Using Neuroanatomical Normative Modeling
Serena Verdi, Seyed Mostafa Kia, Keir X.X. Yong, Duygu Tosun, Jonathan M. Schott, Andre F. Marquand, James H. Cole
Neurology  ·  13 Jun 2023  ·  doi:10.1212/WNL.0000000000207298
Estimating cortical thickness trajectories in children across different scanners using transfer learning from normative models
Estimating cortical thickness trajectories in children across different scanners using transfer learning from normative models
C. Gaiser, P. Berthet, S.M. Kia, M. A. Frens, C. F. Beckmann, R. L. Muetzel, A. Marquand
Cold Spring Harbor Laboratory  ·  02 Mar 2023  ·  doi:10.1101/2023.03.02.530742

2022

Closing the life-cycle of normative modeling using federated hierarchical Bayesian regression
Closing the life-cycle of normative modeling using federated hierarchical Bayesian regression
Seyed Mostafa Kia, Hester Huijsdens, Saige Rutherford, Augustijn de Boer, Richard Dinga, …, Maarten Mennes, Ole A. Andreassen, Lars T. Westlye, Christian F. Beckmann, Andre F. Marquand
PLOS ONE  ·  08 Dec 2022  ·  doi:10.1371/JOURNAL.PONE.0278776
Accommodating site variation in neuroimaging data using normative and hierarchical Bayesian models
Accommodating site variation in neuroimaging data using normative and hierarchical Bayesian models
Johanna M.M. Bayer, Richard Dinga, Seyed Mostafa Kia, Akhil R. Kottaram, Thomas Wolfers, Jinglei Lv, Andrew Zalesky, Lianne Schmaal, Andre Marquand
NeuroImage  ·  01 Dec 2022  ·  doi:10.1016/J.NEUROIMAGE.2022.119699
Examining real-world Alzheimer s disease heterogeneity using neuroanatomical normative modelling
Examining real-world Alzheimer’s disease heterogeneity using neuroanatomical normative modelling
Flavia Loreto, Serena Verdi, Seyed Mostafa Kia, Aleksandar Duvnjak, Haneen Hakeem, …, Zarni Win, Richard Perry, Andre F. Marquand, James H. Cole, Paresh Malhotra
Cold Spring Harbor Laboratory  ·  04 Nov 2022  ·  doi:10.1101/2022.11.02.22281597
Non-Gaussian Normative Modelling With Hierarchical Bayesian Regression
Non-Gaussian Normative Modelling With Hierarchical Bayesian Regression
Augustijn A.A. de Boer, Johanna M. M. Bayer, Seyed Mostafa Kia, Saige Rutherford, Mariam Zabihi, …, Lars T. Westlye, Ole A. Andreassen, Max Hinne, Christian F. Beckmann, Andre Marquand
Cold Spring Harbor Laboratory  ·  07 Oct 2022  ·  doi:10.1101/2022.10.05.510988
Revealing Individual Neuroanatomical Heterogeneity in Alzheimer s Disease
Revealing Individual Neuroanatomical Heterogeneity in Alzheimer’s Disease
Serena Verdi, Seyed Mostafa Kia, Keir Yong, Duygu Tosun, Jonathan M. Schott, Andre F. Marquand, James H. Cole
Cold Spring Harbor Laboratory  ·  03 Jul 2022  ·  doi:10.1101/2022.06.30.22277053
The normative modeling framework for computational psychiatry
The normative modeling framework for computational psychiatry
Saige Rutherford, Seyed Mostafa Kia, Thomas Wolfers, Charlotte Fraza, Mariam Zabihi, …, Amanda Worker, Serena Verdi, Henricus G. Ruhe, Christian F. Beckmann, Andre F. Marquand
Nature Protocols  ·  01 Jun 2022  ·  doi:10.1038/S41596-022-00696-5
MLCN 2018 preface
MLCN 2018 preface
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)  ·  29 May 2022  ·  [no id info]
Age-related brain deviations and aggression
Age-related brain deviations and aggression
Nathalie E. Holz, Dorothea L. Floris, Alberto Llera, Pascal M. Aggensteiner, Seyed Mostafa Kia, …, Jilly Naaijen, Daniel Brandeis, Christian Beckmann, Tobias Banaschewski, Andre F. Marquand
Psychological Medicine  ·  22 Apr 2022  ·  doi:10.1017/S003329172200068X
Regional, circuit, and network heterogeneity of brain abnormalities in psychiatric disorders
Regional, circuit, and network heterogeneity of brain abnormalities in psychiatric disorders
Ashlea Segal, Linden Parkes, Kevin Aquino, Seyed Mostafa Kia, Thomas Wolfers, …, Michael Berk, Sue Cotton, Mark A. Bellgrove, Andre F. Marquand, Alex Fornito
Cold Spring Harbor Laboratory  ·  10 Mar 2022  ·  doi:10.1101/2022.03.07.22271986
Charting brain growth and aging at high spatial precision
Charting brain growth and aging at high spatial precision
Saige Rutherford, Charlotte Fraza, Richard Dinga, Seyed Mostafa Kia, Thomas Wolfers, …, Lars T Westlye, Roland Zahn, Henricus G Ruhe, Christian Beckmann, Andre F Marquand
eLife  ·  01 Feb 2022  ·  doi:10.7554/ELIFE.72904
Author response: Charting brain growth and aging at high spatial precision
Author response: Charting brain growth and aging at high spatial precision
Saige Rutherford, Charlotte Fraza, Richard Dinga, Seyed Mostafa Kia, Thomas Wolfers, …, Lars T Westlye, Roland Zahn, Henricus G Ruhe, Christian Beckmann, Andre F Marquand
eLife Sciences Publications, Ltd  ·  24 Jan 2022  ·  doi:10.7554/ELIFE.72904.SA2
PROMISSING: Pruning Missing Values in Neural Networks
PROMISSING: Pruning Missing Values in Neural Networks
Seyed Mostafa Kia, Nastaran Mohammadian Rad, Daniel van Opstal, Bart van Schie, Andre F. Marquand, Josien Pluim, Wiepke Cahn, Hugo G. Schnack
arXiv  ·  01 Jan 2022  ·  doi:10.48550/arXiv.2206.01640
Multi-site Normative Modeling of Diffusion Tensor Imaging Metrics Using Hierarchical Bayesian Regression
Multi-site Normative Modeling of Diffusion Tensor Imaging Metrics Using Hierarchical Bayesian Regression
Julio E. Villalón-Reina, Clara A. Moreau, Talia M. Nir, Neda Jahanshad, Anne Maillard, …, Carrie E. Bearden, Seyed Mostafa Kia, Andre F. Marquand, Sebastien Jacquemont, Paul M. Thompson
Lecture Notes in Computer Science  ·  01 Jan 2022  ·  doi:10.1007/978-3-031-16431-6_20

2021

The Normative Modeling Framework for Computational Psychiatry
The Normative Modeling Framework for Computational Psychiatry
Saige Rutherford, Seyed Mostafa Kia, Thomas Wolfers, Charlotte Fraza, Mariam Zabihi, …, Amanda Worker, Serena Verdi, Henricus G. Ruhe, Christian F. Beckmann, Andre F. Marquand
Cold Spring Harbor Laboratory  ·  10 Aug 2021  ·  doi:10.1101/2021.08.08.455583
Charting Brain Growth and Aging at High Spatial Precision
Charting Brain Growth and Aging at High Spatial Precision
Saige Rutherford, Charlotte Fraza, Richard Dinga, Seyed Mostafa Kia, Thomas Wolfers, …, Lars T. Westlye, Roland Zahn, Henricus G. Ruhe, Christian Beckmann, Andre F. Marquand
Cold Spring Harbor Laboratory  ·  08 Aug 2021  ·  doi:10.1101/2021.08.08.455487
Individualized prediction of three- and six-year outcomes of psychosis in a longitudinal multicenter study: a machine learning approach
Individualized prediction of three- and six-year outcomes of psychosis in a longitudinal multicenter study: a machine learning approach
Jessica de Nijs, Thijs J. Burger, Ronald J. Janssen, Seyed Mostafa Kia, Daniël P. J. van Opstal, …, Therese van Amelsvoort, Jim van Os, Ruud van Winkel, Wiepke Cahn, Hugo G. Schnack
npj Schizophrenia  ·  02 Jul 2021  ·  doi:10.1038/S41537-021-00162-3
Normative modeling of neuroimaging data using generalized additive models of location scale and shape
Normative modeling of neuroimaging data using generalized additive models of location scale and shape
Richard Dinga, Charlotte J. Fraza, Johanna M.M. Bayer, Seyed Mostafa Kia, Christian F. Beckmann, Andre F. Marquand
Cold Spring Harbor Laboratory  ·  14 Jun 2021  ·  doi:10.1101/2021.06.14.448106
Federated Multi-Site Normative Modeling using Hierarchical Bayesian Regression
Federated Multi-Site Normative Modeling using Hierarchical Bayesian Regression
Seyed Mostafa Kia, Hester Huijsdens, Saige Rutherford, Richard Dinga, Thomas Wolfers, Maarten Mennes, Ole A. Andreassen, Lars T. Westlye, Christian F. Beckmann, Andre F. Marquand
Cold Spring Harbor Laboratory  ·  30 May 2021  ·  doi:10.1101/2021.05.28.446120
Explanatory latent representation of heterogeneous spatial maps of task-fMRI in large-scale datasets
Explanatory latent representation of heterogeneous spatial maps of task-fMRI in large-scale datasets
Mariam Zabihi, Seyed Mostafa Kia, Thomas Wolfers, Stijn de Boer, Charlotte Fraza, …, Richard Dinga, Alberto Llera Arenas, Danilo Bzdok, Christian F. Beckmann, Andre Marquand
Cold Spring Harbor Laboratory  ·  14 Mar 2021  ·  doi:10.1101/2021.03.10.434856
Replicating extensive brain structural heterogeneity in individuals with schizophrenia and bipolar disorder
Replicating extensive brain structural heterogeneity in individuals with schizophrenia and bipolar disorder
Thomas Wolfers, Jaroslav Rokicki, Dag Alnæs, Pierre Berthet, Ingrid Agartz, …, Ingrid Melle, Christian F. Beckmann, Ole A. Andreassen, Andre F. Marquand, Lars T. Westlye
Human Brain Mapping  ·  27 Feb 2021  ·  doi:10.1002/HBM.25386
Accommodating site variation in neuroimaging data using normative and hierarchical Bayesian models
Accommodating site variation in neuroimaging data using normative and hierarchical Bayesian models
Johanna M. M. Bayer, Richard Dinga, Seyed Mostafa Kia, Akhil R. Kottaram, Thomas Wolfers, Jinglei Lv, Andrew Zalesky, Lianne Schmaal, Andre Marquand
Cold Spring Harbor Laboratory  ·  11 Feb 2021  ·  doi:10.1101/2021.02.09.430363
Machine Learning in Clinical Neuroimaging
Machine Learning in Clinical Neuroimaging
Lecture Notes in Computer Science  ·  01 Jan 2021  ·  doi:10.1007/978-3-030-87586-2

2020

Fractionating autism based on neuroanatomical normative modeling
Fractionating autism based on neuroanatomical normative modeling
Mariam Zabihi, Dorothea L. Floris, Seyed Mostafa Kia, Thomas Wolfers, Julian Tillmann, …, Declan Murphy, Christine Ecker, Jan K. Buitelaar, Christian F. Beckmann, Andre Marquand
Translational Psychiatry  ·  06 Nov 2020  ·  doi:10.1038/S41398-020-01057-0
Replicating extensive brain structural heterogeneity in individuals with schizophrenia and bipolar disorder
Replicating extensive brain structural heterogeneity in individuals with schizophrenia and bipolar disorder
Thomas Wolfers, Jaroslav Rokicki, Dag Alnæs, Pierre Berthet, Ingrid Agartz, …, Ingrid Melle, Christian F Beckmann, Ole A Andreassen, Andre F Marquand, Lars T Westlye
Cold Spring Harbor Laboratory  ·  11 May 2020  ·  doi:10.1101/2020.05.08.20095091
Linear methods for classification
Linear methods for classification
Andre F. Marquand, Seyed Mostafa Kia
Machine Learning  ·  01 Jan 2020  ·  doi:10.1016/B978-0-12-815739-8.00005-5
Hierarchical Bayesian Regression for Multi-Site Normative Modeling of Neuroimaging Data
Hierarchical Bayesian Regression for Multi-Site Normative Modeling of Neuroimaging Data
Seyed Mostafa Kia, Hester Huijsdens, Richard Dinga, Thomas Wolfers, Maarten Mennes, Ole A. Andreassen, Lars T. Westlye, Christian F. Beckmann, Andre F. Marquand
arXiv  ·  01 Jan 2020  ·  doi:10.48550/arxiv.2005.12055
Hierarchical Bayesian Regression for Multi-site Normative Modeling of Neuroimaging Data
Hierarchical Bayesian Regression for Multi-site Normative Modeling of Neuroimaging Data
Seyed Mostafa Kia, Hester Huijsdens, Richard Dinga, Thomas Wolfers, Maarten Mennes, Ole A. Andreassen, Lars T. Westlye, Christian F. Beckmann, Andre F. Marquand
Lecture Notes in Computer Science  ·  01 Jan 2020  ·  doi:10.1007/978-3-030-59728-3_68
Gender and Emotion Recognition from Implicit User Behavior Signals
Gender and Emotion Recognition from Implicit User Behavior Signals
Maneesh Bilalpur, Seyed Mostafa Kia, Mohan Kankanhalli, Ramanathan Subramanian
arXiv  ·  01 Jan 2020  ·  doi:10.48550/arxiv.2006.13386

2019

From pattern classification to stratification: towards conceptualizing the heterogeneity of Autism Spectrum Disorder
From pattern classification to stratification: towards conceptualizing the heterogeneity of Autism Spectrum Disorder
Thomas Wolfers, Dorothea L. Floris, Richard Dinga, Daan van Rooij, Christina Isakoglou, …, Jonathan O’Muircheartaigh, Declan Murphy, Jan K. Buitelaar, Andre F. Marquand, Christian F. Beckmann
Neuroscience & Biobehavioral Reviews  ·  01 Sep 2019  ·  doi:10.1016/J.NEUBIOREV.2019.07.010
Correction: Conceptualizing mental disorders as deviations from normative functioning
Correction: Conceptualizing mental disorders as deviations from normative functioning
Andre F. Marquand, Seyed Mostafa Kia, Mariam Zabihi, Thomas Wolfers, Jan K. Buitelaar, Christian F. Beckmann
Molecular Psychiatry  ·  26 Jun 2019  ·  doi:10.1038/S41380-019-0451-Z
Conceptualizing mental disorders as deviations from normative functioning
Conceptualizing mental disorders as deviations from normative functioning
Andre F. Marquand, Seyed Mostafa Kia, Mariam Zabihi, Thomas Wolfers, Jan K. Buitelaar, Christian F. Beckmann
Molecular Psychiatry  ·  14 Jun 2019  ·  doi:10.1038/s41380-019-0441-1
86. Understanding the Heterogeneous Phenotype of Psychiatric Disorders Using Normative Models
86. Understanding the Heterogeneous Phenotype of Psychiatric Disorders Using Normative Models
Andre Marquand, Thomas Wolfers, Mariam Zabihi, Seyed Mostafa Kia, Richard Dinga, Christian Beckmann
Biological Psychiatry  ·  01 May 2019  ·  doi:10.1016/J.BIOPSYCH.2019.03.100

2018

Deep learning for automatic stereotypical motor movement detection using wearable sensors in autism spectrum disorders
Deep learning for automatic stereotypical motor movement detection using wearable sensors in autism spectrum disorders
Nastaran Mohammadian Rad, Seyed Mostafa Kia, Calogero Zarbo, Twan Van Laarhoven, Giuseppe Jurman, Paola Venuti, Elena Marchiori, Cesare Furlanello
Signal Processing  ·  01 Mar 2018  ·  doi:https://doi.org/10.1016/j.sigpro.2017.10.011
Normative Modeling of Neuroimaging Data Using Scalable Multi-task Gaussian Processes
Normative Modeling of Neuroimaging Data Using Scalable Multi-task Gaussian Processes
Seyed Mostafa Kia, Andre Marquand
Lecture Notes in Computer Science  ·  01 Jan 2018  ·  doi:10.1007/978-3-030-00931-1_15
Scalable Multi-Task Gaussian Process Tensor Regression for Normative Modeling of Structured Variation in Neuroimaging Data
Scalable Multi-Task Gaussian Process Tensor Regression for Normative Modeling of Structured Variation in Neuroimaging Data
Seyed Mostafa Kia, Christian F. Beckmann, Andre F. Marquand
arXiv  ·  01 Jan 2018  ·  doi:10.48550/arxiv.1808.00036
Normative Modeling of Neuroimaging Data using Scalable Multi-Task Gaussian Processes
Normative Modeling of Neuroimaging Data using Scalable Multi-Task Gaussian Processes
Seyed Mostafa Kia, Andre Marquand
arXiv  ·  01 Jan 2018  ·  doi:10.48550/arxiv.1806.01047
Neural Processes Mixed-Effect Models for Deep Normative Modeling of Clinical Neuroimaging Data
Neural Processes Mixed-Effect Models for Deep Normative Modeling of Clinical Neuroimaging Data
Seyed Mostafa Kia, Andre F. Marquand
arXiv  ·  01 Jan 2018  ·  doi:10.48550/arxiv.1812.04998

2017

Gender and emotion recognition with implicit user signals
Gender and emotion recognition with implicit user signals
Maneesh Bilalpur, Seyed Mostafa Kia, Manisha Chawla, Tat-Seng Chua, Ramanathan Subramanian
Proceedings of the 19th ACM International Conference on Multimodal Interaction  ·  03 Nov 2017  ·  doi:10.1145/3136755.3136790
Discovering gender differences in facial emotion recognition via implicit behavioral cues
Discovering gender differences in facial emotion recognition via implicit behavioral cues
Maneesh Bilalpur, Seyed Mostafa Kia, Tat-Seng Chua, Ramanathan Subramanian
2017 Seventh International Conference on Affective Computing and Intelligent Interaction (ACII)  ·  01 Oct 2017  ·  doi:10.1109/ACII.2017.8273588
Group-level spatio-temporal pattern recovery in MEG decoding using multi-task joint feature learning
Group-level spatio-temporal pattern recovery in MEG decoding using multi-task joint feature learning
Seyed Mostafa Kia, Fabian Pedregosa, Anna Blumenthal, Andrea Passerini
Journal of Neuroscience Methods  ·  01 Jun 2017  ·  doi:10.1016/J.JNEUMETH.2017.05.004
Interpretability of Multivariate Brain Maps in Linear Brain Decoding: Definition, and Heuristic Quantification in Multivariate Analysis of MEG Time-Locked Effects
Interpretability of Multivariate Brain Maps in Linear Brain Decoding: Definition, and Heuristic Quantification in Multivariate Analysis of MEG Time-Locked Effects
Seyed Mostafa Kia, Sandro Vega Pons, Nathan Weisz, Andrea Passerini
Frontiers in Neuroscience  ·  23 Jan 2017  ·  doi:10.3389/FNINS.2016.00619
Gender and Emotion Recognition with Implicit User Signals
Gender and Emotion Recognition with Implicit User Signals
Maneesh Bilalpur, Seyed Mostafa Kia, Manisha Chawla, Tat-Seng Chua, Ramanathan Subramanian
arXiv  ·  01 Jan 2017  ·  doi:10.48550/arxiv.1708.08735
Discovering Gender Differences in Facial Emotion Recognition via Implicit Behavioral Cues
Discovering Gender Differences in Facial Emotion Recognition via Implicit Behavioral Cues
Maneesh Bilalpur, Seyed Mostafa Kia, Tat-Seng Chua, Ramanathan Subramanian
arXiv  ·  01 Jan 2017  ·  doi:10.48550/arxiv.1708.08729
Deep Learning for Automatic Stereotypical Motor Movement Detection using Wearable Sensors in Autism Spectrum Disorders
Deep Learning for Automatic Stereotypical Motor Movement Detection using Wearable Sensors in Autism Spectrum Disorders
Nastaran Mohammadian Rad, Seyed Mostafa Kia, Calogero Zarbo, Twan van Laarhoven, Giuseppe Jurman, Paola Venuti, Elena Marchiori, Cesare Furlanello
arXiv  ·  01 Jan 2017  ·  doi:10.48550/arxiv.1709.05956

2016

Stereotypical Motor Movement Detection in Dynamic Feature Space
Stereotypical Motor Movement Detection in Dynamic Feature Space
Nastaran Mohammadian Rad, Seyed Mostafa Kia, Calogero Zarbo, Giuseppe Jurman, Paola Venuti, Cesare Furlanello
2016 IEEE 16th International Conference on Data Mining Workshops (ICDMW)  ·  01 Dec 2016  ·  doi:10.1109/ICDMW.2016.0076
Multi-Task Learning for Interpretation of Brain Decoding Models
Multi-Task Learning for Interpretation of Brain Decoding Models
Seyed Mostafa Kia, Sandro Vega-Pons, Emanuele Olivetti, Paolo Avesani
Lecture Notes in Computer Science  ·  01 Jan 2016  ·  doi:10.1007/978-3-319-45174-9_1
Modeling the cooling performance of vortex tube using a genetic algorithm-based artificial neural network
Modeling the cooling performance of vortex tube using a genetic algorithm-based artificial neural network
Hassan Pouraria, Seyed Kia, Warn-Gyu Park, Bahman Mehdizadeh
Thermal Science  ·  01 Jan 2016  ·  doi:10.2298/TSCI140126112P

2015

DECAF: MEG-Based Multimodal Database for Decoding Affective Physiological Responses
DECAF: MEG-Based Multimodal Database for Decoding Affective Physiological Responses
Mojtaba Khomami Abadi, Ramanathan Subramanian, Seyed Mostafa Kia, Paolo Avesani, Ioannis Patras, Nicu Sebe
IEEE Transactions on Affective Computing  ·  01 Jul 2015  ·  doi:10.1109/TAFFC.2015.2392932
Movie Genre Classification by Exploiting MEG Brain Signals
Movie Genre Classification by Exploiting MEG Brain Signals
Pouya Ghaemmaghami, Mojtaba Khomami Abadi, Seyed Mostafa Kia, Paolo Avesani, Nicu Sebe
Lecture Notes in Computer Science  ·  01 Jan 2015  ·  doi:10.1007/978-3-319-23231-7_61

2014

Sensor-level maps with the kernel two-sample test
Sensor-level maps with the kernel two-sample test
Emanuele Olivetti, Seyed Mostafa Kia, Paolo Avesani
2014 International Workshop on Pattern Recognition in Neuroimaging  ·  01 Jun 2014  ·  doi:10.1109/PRNI.2014.6858537
MEG decoding across subjects
MEG decoding across subjects
Emanuele Olivetti, Seved Mostafa Kia, Paolo Avesani
2014 International Workshop on Pattern Recognition in Neuroimaging  ·  01 Jun 2014  ·  doi:10.1109/PRNI.2014.6858538

2013

User-centric Affective Video Tagging from MEG and Peripheral Physiological Responses
User-centric Affective Video Tagging from MEG and Peripheral Physiological Responses
Mojtaba Khomami Abadi, Seyed Mostafa Kia, Ramanathan Subramanian, Paolo Avesani, Nicu Sebe
2013 Humaine Association Conference on Affective Computing and Intelligent Interaction  ·  01 Sep 2013  ·  doi:10.1109/ACII.2013.102
The Kernel Two-Sample Test vs. Brain Decoding
The Kernel Two-Sample Test vs. Brain Decoding
Emanuele Olivetti, Danilo Benozzo, Seyed Mostafa Kia, Marta Ellero, Thomas Hartmann
2013 International Workshop on Pattern Recognition in Neuroimaging  ·  01 Jun 2013  ·  doi:10.1109/PRNI.2013.41
Discrete Cosine Transform for MEG Signal Decoding
Discrete Cosine Transform for MEG Signal Decoding
Seyed Mostafa Kia, Emanuele Olivetti, Paolo Avesani
2013 International Workshop on Pattern Recognition in Neuroimaging  ·  01 Jun 2013  ·  doi:10.1109/PRNI.2013.42
Decoding affect in videos employing the MEG brain signal
Decoding affect in videos employing the MEG brain signal
Mojtaba Khomami Abadi, Mostafa Kia, Ramanathan Subramanian, Paolo Avesani, Nicu Sebe
2013 10th IEEE International Conference and Workshops on Automatic Face and Gesture Recognition (FG)  ·  01 Apr 2013  ·  doi:10.1109/FG.2013.6553809

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ISSN 2640-3498 Online Proceedings of Machine Learning Research The ISSN Portal
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